TAP CCAAT_HAP5 (NF-YC) in Setaria viridis

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

NF-YC
CCAAT-Dr1_Domain
NF-YB
HMG_box

(Domain names are clickable)



List of proteins (16)

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namename additionClick button to show/hide sequence: Download sequence?
Sevir.1G070500.1.ppacid=32666773 transcript=Sevir.1G070500.1 locus=Sevir.1G070500 ID=Sevir.1G070500.1.v1.1 annot-version=v1.1
Sevir.1G291400.1.ppacid=32667371 transcript=Sevir.1G291400.1 locus=Sevir.1G291400 ID=Sevir.1G291400.1.v1.1 annot-version=v1.1
Sevir.2G089200.1.ppacid=32639319 transcript=Sevir.2G089200.1 locus=Sevir.2G089200 ID=Sevir.2G089200.1.v1.1 annot-version=v1.1
Sevir.2G258600.1.ppacid=32637054 transcript=Sevir.2G258600.1 locus=Sevir.2G258600 ID=Sevir.2G258600.1.v1.1 annot-version=v1.1
Sevir.3G012000.1.ppacid=32676751 transcript=Sevir.3G012000.1 locus=Sevir.3G012000 ID=Sevir.3G012000.1.v1.1 annot-version=v1.1
Sevir.3G198900.1.ppacid=32677715 transcript=Sevir.3G198900.1 locus=Sevir.3G198900 ID=Sevir.3G198900.1.v1.1 annot-version=v1.1
Sevir.3G353500.1.ppacid=32678237 transcript=Sevir.3G353500.1 locus=Sevir.3G353500 ID=Sevir.3G353500.1.v1.1 annot-version=v1.1
Sevir.4G280800.1.ppacid=32647949 transcript=Sevir.4G280800.1 locus=Sevir.4G280800 ID=Sevir.4G280800.1.v1.1 annot-version=v1.1
Sevir.5G127800.1.ppacid=32672392 transcript=Sevir.5G127800.1 locus=Sevir.5G127800 ID=Sevir.5G127800.1.v1.1 annot-version=v1.1
Sevir.6G025900.1.ppacid=32642221 transcript=Sevir.6G025900.1 locus=Sevir.6G025900 ID=Sevir.6G025900.1.v1.1 annot-version=v1.1
Sevir.6G204100.1.ppacid=32642849 transcript=Sevir.6G204100.1 locus=Sevir.6G204100 ID=Sevir.6G204100.1.v1.1 annot-version=v1.1
Sevir.7G286200.1.ppacid=32660097 transcript=Sevir.7G286200.1 locus=Sevir.7G286200 ID=Sevir.7G286200.1.v1.1 annot-version=v1.1
Sevir.8G087600.1.ppacid=32632882 transcript=Sevir.8G087600.1 locus=Sevir.8G087600 ID=Sevir.8G087600.1.v1.1 annot-version=v1.1
Sevir.8G154800.1.ppacid=32632239 transcript=Sevir.8G154800.1 locus=Sevir.8G154800 ID=Sevir.8G154800.1.v1.1 annot-version=v1.1
Sevir.9G007800.1.ppacid=32654056 transcript=Sevir.9G007800.1 locus=Sevir.9G007800 ID=Sevir.9G007800.1.v1.1 annot-version=v1.1
Sevir.9G471700.1.ppacid=32654932 transcript=Sevir.9G471700.1 locus=Sevir.9G471700 ID=Sevir.9G471700.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum